# Data Sources
This project prepackaged the ICD-10-CM, ICD-10-PCS, and the CCSR for diagnosis and procedures vocabularies, along with synthetic clinical notes generated based on the case reports in the original articles from [Pubmed Central Open Access Subset](https://www.ncbi.nlm.nih.gov/pmc/tools/openftlist/) with GPT4o. 

1. The code, labels, and definitions of ICD-10-CM and ICD-10-PCS were queried from the [UMLS API](https://documentation.uts.nlm.nih.gov/rest/home.html).
2. [CCSR for diagnosis and procedures](https://hcup-us.ahrq.gov/toolssoftware/ccsr/ccs_refined.jsp)
3. The prompt used in the note summarization recipe was inspired by the original article and its GitHub tools under the Apache License 2.0. Citation: Emma Croxford, Yanjun Gao, Nicholas Pellegrino, Karen Wong, Graham Wills, Elliot First, Miranda Schnier, Kyle Burton, Cris Ebby, Jillian Gorski, Matthew Kalscheur, Samy Khalil, Marie Pisani, Tyler Rubeor, Peter Stetson, Frank Liao, Cherodeep Goswami, Brian Patterson, Majid Afshar, Development and validation of the provider documentation summarization quality instrument for large language models, Journal of the American Medical Informatics Association, Volume 32, Issue 6, June 2025, Pages 1050–1060, https://doi.org/10.1093/jamia/ocaf068
4. All selected articles for note generation bear the CC license:

### Reference
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13 . Kashif M, Dudekula R.A, Khaja M. A Rare Case of Cavitary Lesion of the Lung Caused by Mycoplasma pneumoniae in an Immunocompetent Patient. 2017. doi: 10.1155/2017/9602432
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16 . Muacevic A, Adler J.R, Chew C, Wan Hitam W, Ahmad Tajudin L.S. Leptomeningeal Carcinomatosis With Optic Nerve Metastasis Secondary to Breast Cancer. 13. doi: 10.7759/cureus.14200
17 . Hu W, Wang C, Wu Q, Chen Y, Gao W, Ying G, Zhu Y, Yan W. Intracranial hypertension due to spinal cord tumor misdiagnosed as pseudotumor cerebri syndrome: case report. 20. doi: 10.1186/s12883-020-02000-y
18 . Pampiglione S, Rivasi F. Enterobiasis in Ectopic Locations Mimicking Tumor-Like Lesions. 2009. doi: 10.1155/2009/642481
19 . Rouvali A, Vlastarakos P, Stavros S, Giourga M, Pappa K, Gerede A, Rodolakis A, Domali E. Treatment of Cervical Pregnancy with Ultrasound-Guided Intragestational Injection of Methotrexate: A Case Report. 2021. doi: 10.1155/2021/6601461
20 . Ran E, Wang M, Yi Y, Feng M, Liu Y, Saranathan. M. Mercury poisoning complicated by acquired neuromyotonia syndrome. 100. doi: 10.1097/MD.0000000000026910
21 . Paul C, Chakraborty S, Chakraborty S, Goswami K. Constitutional Mismatch Repair Deficiency Syndrome in a patient from India. 8. doi: 10.1002/ccr3.3249
22 . Muacevic A, Adler J.R, Agrawal U, Prabhu M.M. Abiotrophia defectiva: A Rare but Critical Cause of Infective Endocarditis. 11. doi: 10.7759/cureus.6492
23 . Manzato E, Mazzullo M, Gualandi M, Zanetti T, Scanelli G. Anorexia nervosa: from purgative behaviour to nephropathy. a case report. 2. doi: 10.1186/1757-1626-2-46
24 . Pampiglione S, Rivasi F. Enterobiasis in Ectopic Locations Mimicking Tumor-Like Lesions. 2009. doi: 10.1155/2009/642481
25 . Baboci L, Boscolo-Rizzo P, Tirelli G, Da Mosto M.C, Del Mistro A, Pawlita M, Holzinger D, Bertorelle R, Biasini L, Michel A, Schmitt M, Spinato G, Bussani R, Alemany L. Evidence of the causal role of human papillomavirus type 58 in an oropharyngeal carcinoma. 10. doi: 10.1186/1743-422X-10-334
26 . Jiang Q, Wu T, Zhang Y, Wang S, Wang L, Su W, Lin M, Li X. Case Report: A Rare Case of Coexisting of Autoimmune Polyglandular Syndrome Type 3 and Isolated Gonadotropin-Releasing Hormone Deficiency. 12. doi: 10.3389/fimmu.2021.734685
27 . Gross R, Davis J, Roth J, Querfurth H. Cognitive Impairments Preceding and Outlasting Autoimmune Limbic Encephalitis. 2016. doi: 10.1155/2016/7247235
28 . Roberto A.J, Pinnaka S, Mohan A, Yoon H, Lapidus K.A.B. Adolescent Catatonia Successfully Treated with Lorazepam and Aripiprazole. 2014. doi: 10.1155/2014/309517
29 . ZHAO N, YANG J, ZHANG G. Differential diagnosis between AML infiltration, lymphoma and tuberculosis in a patient presenting with fever and mediastinal lymphadenopathy: A case report. 7. doi: 10.3892/ol.2014.1785
30 . Gross R, Davis J, Roth J, Querfurth H. Cognitive Impairments Preceding and Outlasting Autoimmune Limbic Encephalitis. 2016. doi: 10.1155/2016/7247235
31 . Cunnington J.R, Jois R, Zammit I, Scott D, Isaacs J. Diabetes Insipidus as a Complication of Wegener's Granulomatosis and Its Treatment with Biologic Agents. 2009. doi: 10.1155/2009/346136
32 . Muacevic A, Adler J.R, Golwala P, Kapoor C, Shah M, Merh A, Kansagra A. A Case of Koch's Spine Treated with Modified Transpedicular Vertebral Curettage and Posterior Fixation: A Novel Technique. 8. doi: 10.7759/cureus.915
33 . Sakamoto K, Ito S, Hashimoto N, Hasegawa Y. Pirfenidone as salvage treatment for refractory bleomycin-induced lung injury: a case report of seminoma. 17. doi: 10.1186/s12885-017-3521-0
34 . Cawcutt K, Baddour L.M, Burgess M. A Case of Scopulariopsis brevicaulis Endocarditis with Mycotic Aneurysm in an Immunocompetent Host. 2015. doi: 10.1155/2015/872871
35 . Uthayakumar A, Harrington D. Spontaneous splenic rupture complicating primary varicella zoster infection: a case report. 11. doi: 10.1186/s13104-018-3430-6
36 . Aramini B, Ruggiero C, Stefani A, Morandi U. Giant bulla or pneumothorax: How to distinguish. 62. doi: 10.1016/j.ijscr.2019.08.003
37 . Charoensri S, Sothornwit J, Trirattanapikul A, Pongchaiyakul C. Ketogenic Diet-Induced Diabetic Ketoacidosis in a Young Adult with Unrecognized Type 1 Diabetes. 2021. doi: 10.1155/2021/6620832
38 . Ardissone A, Tonduti D, Moroni I, Farina L, Pichiecchio A, Orcesi S, Chiapparini L, Ghezzi D, Ghezzi D, Legati A, Lamantea E, Barone R, Dorboz I, Boespflug-Tanguy O, Nebbia G, Maggioni M, Garavaglia B. KARS-related diseases: progressive leukoencephalopathy with brainstem and spinal cord calcifications as new phenotype and a review of literature. 13. doi: 10.1186/s13023-018-0788-4
39 . Fan F.S, Yang C, Wang Y. Diffuse Bone Marrow Metastasis as the Initial Presentation of an Occult Breast Cancer. 2018. doi: 10.1155/2018/2946409
40 . Anbardar M.H, Soleimani N, Nikeghbalian S, Mohebbi M. Adrenocortical adenoma with myelolipomatous metaplasia: a potential diagnostic pitfall: a case report and review of the literature. 15. doi: 10.1186/s13256-021-02937-9
41 . Tsagkataki E.S, Flamourakis M.E, Gkionis I.G, Giakoumakis M.I, Delimpaltadakis G.N, Kazamias G.M, Giannikaki E.S, Christodoulakis M.S. Gastric glomus tumor: a case report and review of the literature. 15. doi: 10.1186/s13256-021-03011-0
42 . Carr R, Moreland H, Hsia M.H. Late-stage primary renal angiosarcoma: an extremely rare cancer complicated by COVID-19 post-operatively. 2021. doi: 10.1093/jscr/rjab562
43 . Lan J, Guo D, Qin X, Chen B, Liu Q. Mixed Neuroendocrine Carcinoma and Hepatocellular Carcinoma: A Case Report and Literature Review. 8. doi: 10.3389/fsurg.2021.678853
44 . Muacevic A, Adler J.R, Lindblad G, Prater S, Chaniotakis S.E, Banks J. Inoperable Left Renal Vein Leiomyosarcoma Refractory to Chemotherapy Invades Inferior Vena Cava and Right Atrium: A Case Report. 13. doi: 10.7759/cureus.13182
45 . Nishiguchi Y, Matsuyama H, Maeda K, Shindo A, Tomimoto H. Miller Fisher syndrome following BNT162b2 mRNA coronavirus 2019 vaccination. 21. doi: 10.1186/s12883-021-02489-x
46 . Sava M, Huynh T, Frugoli A, Kong L, Salehpour M, Barrows B. Colorectal Cancer Related to Chronic Strongyloides stercoralis Infection. 2020. doi: 10.1155/2020/8886460
47 . Muacevic A, Adler J.R, Bhesania S, Chelikam N, Mobin N, Ilyas S, Nimkar N. Incidental Finding of Attenuated Familial Adenomatous Polyposis. 13. doi: 10.7759/cureus.18237
48 . Boncagni F, Pecora L, Durazzi V, Ventrella F. Anesthesiological Management of a Patient with Williams Syndrome Undergoing Spine Surgery. 2016. doi: 10.1155/2016/1371095
49 . Nieman A, de Mast Q, Roestenberg M, Wiersma J, Pop G, Stalenhoef A, Druilhe P, Sauerwein R, van der Ven A. Cardiac complication after experimental human malaria infection: a case report. 8. doi: 10.1186/1475-2875-8-277
50 . Geyer M, Kulamarva G, Davis A. Wegener's Granulomatosis presenting with an abscess in the parotid gland: a case report. 3. doi: 10.1186/1752-1947-3-19
51 . Wani I, Bhat Y, Khan N, Mir F, Nanda S, Shah O.J. Concomitant Rupture of Hydatid Cyst of Liver in Hepatic Duct and Gallbladder: Case Report. 3. doi: 10.4021/gr215e
52 . Finsterer J, Stöllberger C. Myotonic Dystrophy-1 Complicated by Factor-V (Leiden) Mutation. 2015. doi: 10.1155/2015/271639
53 . Butt K, Kumar R, D'Souza J, Limback J, Shah R, Burt J. Catastrophic Prosthetic Valve Endocarditis Caused by Rare Black Fungi. 2018. doi: 10.1155/2018/1758539
54 . Abt N.B, Streiff M.B, Gocke C.B, Kickler T.S, Lanzkron S.M. Idiopathic Acquired Hemophilia A with Undetectable Factor VIII Inhibitor. 2014. doi: 10.1155/2014/484563
55 .  Yang C, Bao X, Liu X, Deng K, Feng M, Yao Y, Wang R, Dora. Z. Rathke cleft cyst masquerading as pituitary abscess. 96. doi: 10.1097/MD.0000000000006303
56 . Gulavi E, Kyende Mutiso S, Mariara Muriuki C, Mukaindo Mwaniki A. Successful Pregnancy Outcome after Open Strassman Metroplasty for Bicornuate Uterus. 2018. doi: 10.1155/2018/4579736
57 . Tianyi F, Kadia B.M, Dimala C.A, Agbor V.N. Delayed diagnosis of transanal prolapse of an ileo-colic intussusception in a 10-month-old infant in rural Cameroon: a case report. 10. doi: 10.1186/s13104-017-2838-8
58 . Trytell A, Darby J, Conron M, Newcomb A, Burns A. Recurrent lung nodules as a presentation of ventricular septal defect‐related endocarditis. 7. doi: 10.1002/rcr2.446
59 . Morimoto T, Izumi M, Ueba H, Ikeuchi M. Humeral Avulsion of the Lateral Collateral Ligament of the Elbow Concomitant with the Medial Epicondyle Fracture of a Child with General Joint Laxity. 2019. doi: 10.1155/2019/1965343
60 . Chinthaka S.W.G.J.W, Satarasinghe R.L, Senanayake S, Weerarathne W.A.P.S.R, Anfaz A.A.M, Deraniyagala M.P. Noncaseating suppurative granulomatous lymphadenitis in adult onset Still’s disease – a diagnostic dilemma in a tuberculosis-endemic region: a case report. 12. doi: 10.1186/s13256-018-1816-7
61 . Nakayama H, Goda M, Kohagura K, Suganuma N, Iwasaki H, Yamazaki H, Toda S, Masudo K, Rino Y, Masuda M. A Large Substernal Goiter that Extended to Both Sides of the Thorax. 2018. doi: 10.1155/2018/6107982
62 . Muacevic A, Adler J.R, Ul Ain Q, Khan O.A, Sherazi M, Baig M.F.A, Siddiqui F. A Rare Case of Isolated Unilateral Atresia of Pulmonary Artery in an Elderly Female. 11. doi: 10.7759/cureus.5869
63 . Nokalna I, Kreile M, Butane D, Kovalova Z, Daneberga Z, Miklasevics E, Gardovska D, Gailite L. X-Linked Lymphoproliferative Disease in Latvia: A Report of Two Clinically Distinct Cases. 2020. doi: 10.1155/2020/7108657
64 . Nokalna I, Kreile M, Butane D, Kovalova Z, Daneberga Z, Miklasevics E, Gardovska D, Gailite L. X-Linked Lymphoproliferative Disease in Latvia: A Report of Two Clinically Distinct Cases. 2020. doi: 10.1155/2020/7108657
65 . Mo J.H, Tan D, Zhao X.S, Tjoa T, Wang B.Y. Anaplastic Thyroid Carcinoma Histologically Mimicking a Plasmacytoma. 10. doi: 10.3390/diagnostics10010029
66 . Muacevic A, Adler J.R, Sanchez K, Ullah A, Waler A.R, Chakfe Y. Improving Ambulation and Minimizing Disability with Therapeutic Plasma Exchange in a Stiff-person Syndrome Patient with Recurrent Falls. 11. doi: 10.7759/cureus.6209
67 . Muacevic A, Adler J.R, Bedanie G, Abaleka F.I, Tikue A, Thongtan T, Ansari M.M. Atypical Presentation of Fatal Disease: Painless Aortic Dissection. 13. doi: 10.7759/cureus.14355
68 . Sheng O.C, Wu R, Chang I. Spontaneous spinal epidural hematoma: a case report. 14. doi: 10.1186/s12245-021-00379-0
69 . Morita N, Okuse C, Itoh F, Suzuki M, Suetani K, Nakano H, Hiraishi T, Ishigooka S, Mori S, Shimamura T, Asakura T, Koike J. A rare case of Epstein–Barr virus-positive mucocutaneous ulcer that developed into an intestinal obstruction: a case report. 20. doi: 10.1186/s12876-020-1162-2
70 . Yoshioka K, Watanabe K, Toyama Y, Chiba K, Matsumoto M. Kyphectomy for severe kyphosis with pyogenic spondylitis associated with myelomeningocele: a case report. 6. doi: 10.1186/1748-7161-6-5
71 . Doycheva I, Limaye A, Suman A, Forsmark C.E, Sultan S. Bouveret's Syndrome: Case Report and Review of the Literature. 2009. doi: 10.1155/2009/914951
72 .  Ryan M.F, Desai B.K. Ovarian Torsion in a 5-Year Old: A Case Report and Review. 2012. doi: 10.1155/2012/679121
73 . Gersey Z.C, Rajjoub K.R, Pearce T.M, Segel S.A, Gardner P.A, Snyderman C.H, Wang E.W, Zenonos G.A. Immunoglobulin G4 hypophysitis in a 63-year-old woman with no autoimmune history: a case report. 15. doi: 10.1186/s13256-021-03018-7
74 . Muacevic A, Adler J.R, Ayas M.F, Ayas Z, Elazzamy H, Barawi M. A Case of Esophageal Plasmablastic Lymphoma With a Literature Review. 13. doi: 10.7759/cureus.19664
75 . Topiol E.S, Minarich L.A, Williams C.A, Zori R.T, Kays D.W, Haller M.J. Neonatal diabetes mellitus and congenital diaphragmatic hernia: coincidence or concurrent etiology?. 2012. doi: 10.1186/1687-9856-2012-21
76 .  Habertheuer A, Andreas M, Wiedemann D, Rath C, Kocher A. Giant lateral left ventricular wall aneurysm sparing the submitral apparatus. 8. doi: 10.1186/1749-8090-8-201
77 . Lee C.H, Kim S.H, Kwon D.H, Jang K.H, Chung Y.H, Moon J.D. Two Cases of Methemoglobinemia Induced by the Exposure to Nitrobenzene and Aniline. 25. doi: 10.1186/2052-4374-25-31
78 . Sozutek A, Irkorucu O, Reyhan E, Yener K, Besen A.A, Erdogan K.E, Gonlusen G, Doran F. A Giant Aggressive Angiomyxoma of the Pelvis Misdiagnosed as Incarcerated Femoral Hernia: A Case Report and Review of the Literature. 2016. doi: 10.1155/2016/9256749
79 . Chau A, Ramesh K, Jagannath A.D, Arora S. Rheumatoid arthritis in an adult patient with mosaic distal 18q-, 18p- and ring chromosome 18. 6. doi: 10.12688/f1000research.11539.2
80 . Iida S, Nakamura M, Asayama S, Kunieda T, Kaneko S, Osaka H, Kusaka H. Rapidly progressive psychotic symptoms triggered by infection in a patient with methylenetetrahydrofolate reductase deficiency: a case report. 17. doi: 10.1186/s12883-017-0827-0
81 . Muacevic A, Adler J.R, Klenda J, Boppana L.K.T, Vindhyal M.R. Heart Failure Secondary to Left Ventricular Non-compaction Cardiomyopathy in a 26-Year-Old Male. 10. doi: 10.7759/cureus.3011
82 . Bresnahan J.J, Winthrop Z.A, Salman R, Majeed S. Alagille Syndrome: A Case Report Highlighting Dysmorphic Facies, Chronic Illness, and Depression. 2016. doi: 10.1155/2016/1657691
83 . Kashou A.H, Braiteh N, Zgheib A, Kashou H.E. Acute aortoiliac occlusive disease during percutaneous transluminal angioplasty in the setting of ST-elevation myocardial infarction: a case report. 12. doi: 10.1186/s13256-017-1544-4
84 . Lee C.H, Kim S.H, Kwon D.H, Jang K.H, Chung Y.H, Moon J.D. Two Cases of Methemoglobinemia Induced by the Exposure to Nitrobenzene and Aniline. 25. doi: 10.1186/2052-4374-25-31
85 . Bin Islam S, Mazumder R.N, Chisti M.J, , Sahreen L, Ahmed T, Haque Alam N. Captopril in Congenital Chloride Diarrhoea: A Case Study. 33. 
86 . Wada N, Yamashita K, Yamada Y, Kira J, Honda H, Hiwatashi A, Togao O, Kamei R, Momosaka D, Maeda Y, Matsushita T, Yamasaki R, Iida K. Calcium pyrophosphate dihydrate crystal deposition disease of the spinal dura mater: a case report. 4. doi: 10.1259/bjrcr.20170049
87 . Muacevic A, Adler J.R, Atiq S, Mobley J.M, Atiq O.O, Atiq M.O, Meena N. A Unique Case of Severe Anemia Secondary to Copper Deficiency in an Adult Patient. 10. doi: 10.7759/cureus.3636
88 . Muacevic A, Adler J.R, Narayanasami E, Umakanth M, Suganthan N. Dengue Hemorrhagic Fever Complicated With Hemophagocytic Lymphohistiocytosis in an Adult With Diabetic Ketoacidosis. 12. doi: 10.7759/cureus.10172
89 . Muacevic A, Adler J.R, Patel A.R, Patel A.R, Rainville H. Case of Irreducible Ileocecal Intussusception Due to Leiomyoma of the Colon. 11. doi: 10.7759/cureus.5583
90 . De Pauw V, Navez J, Holbrechts S, Lemaitre J. Acute appendicitis as an unusual cause of invasive ductal breast carcinoma metastasis. 2020. doi: 10.1093/jscr/rjaa535
91 . Fang Z, Su Y, Sun H, Ge M, Qi Z, Hao C, Qian S, Ma X. Case Report : Li-Fraumeni Syndrome with Central Nervous System Tumors in Two Siblings. 21. doi: 10.1186/s12887-021-03070-8
92 .  Gunasekera S.N, Madurapperuma C, Weerasooriya N, Karunathilake H, Jayanaga A. A rare presentation of Takayasu’s arteritis- unilateral finger clubbing – case report. 4. doi: 10.1186/s41927-020-00166-z
93 . Muacevic A, Adler J.R, Guimaraes N, Vila Nova C, Oliveira Dias R, Fonseca Pinho J, Valente Cecílio J. Distal Pancreatectomy for Solid Pseudopapillary Tumor of the Pancreas: A Case Report. 13. doi: 10.7759/cureus.19880
94 . Fang Z, Su Y, Sun H, Ge M, Qi Z, Hao C, Qian S, Ma X. Case Report : Li-Fraumeni Syndrome with Central Nervous System Tumors in Two Siblings. 21. doi: 10.1186/s12887-021-03070-8
95 . Wathurapatha W, Rathnamali B.G.A, Dissanayake U. Sensory-Motor Polyneuropathy and Digital Ischemia: A Rare Presentation of Granulomatosis with Polyangiitis. 2021. doi: 10.1155/2021/5353575
96 . Sanada Y, Osada S, Tanaka Y, Tokuyama Y, Yoshida K. A Case Report of Intraductal Papillary-Mucinous Neoplasm of the Pancreas Showing Morphologic Transformation during Followup Periods. 2009. doi: 10.1155/2009/373465
97 . Kontoangelos K, Koukia E, Papanikolaou V, Chrysovergis A, Maillis A, Papadimitriou G.N. Suicidal Behavior in a Patient with Burning Mouth Syndrome. 2014. doi: 10.1155/2014/405106
98 . Echlin P.S, Upshur R.E, McKeag D.B, Jayatilake H.P. Traumatic deep vein thrombosis in a soccer player: A case study. 2. doi: 10.1186/1477-9560-2-8
99 . Kasamatsu Y, Kida T, Shigeru M, Tagashira T, Murai N, Takai E, Takaoka H. Clinically suspected acute myopericarditis with cardiac tamponade associated with peripheral blood eosinophilia presenting in early pregnancy: a case report. 7. doi: 10.1186/1752-1947-7-129
100 . Lucerna A, Espinosa J, Zaman T, Hertz R, Stranges D. Limb Pain as Unusual Presentation of a Parietal Intraparenchymal Bleeding Associated with Crack Cocaine Use: A Case Report. 2018. doi: 10.1155/2018/9598675
101 . Cromlin H, Rodriguez-Villalobos H, Deplano A, Duprez T, Hantson P. Neuroinvasive Infection from O117:K52:H-Escherichia coli following Acute Pyelonephritis. 2017. doi: 10.1155/2017/8976754
102 . Liebling E.J, Sze R.W, Behrens E.M. Vitamin C deficiency mimicking inflammatory bone disease of the hand. 18. doi: 10.1186/s12969-020-00439-4
103 . Luo N, Tan S, Liang M, Li X, Liu S, Singh S, Chen M, Yang W, He Y, Chen C, Liang M. Pulmonary nocardiosis in a patient with pemphigus foliaceus: case report and literature review. 21. doi: 10.1186/s12879-020-05673-5
104 . Yamamoto H, Yokota A, Suzuki N, Tachibana M, Tsutsumi Y. Gastric perforation caused by secondary systemic amyloidosis. 9. doi: 10.1002/ccr3.4254
105 . Muacevic A, Adler J.R, Ukoha;given-names:Chijioke D C.D, Nguyen N. Pulmonary Mucormycosis: An Interesting Case of Rhizopus Mucormycosis. 13. doi: 10.7759/cureus.16210
